v2.0.0-beta: write tools, pending-changes queue, inference loop, API routes

Phase 2 of v2.0. BooCoder is now a functional write-capable chatbot.

Write-path guard: resolveWritePath() uses resolve() (no realpath — files may
not exist for creates) + prefix-check + secret-file deny list (.env, *.pem,
id_rsa*, etc.). 23 unit tests cover traversal attacks.

Pending-changes service: queueEdit/Create/Delete → applyOne/All →
rejectOne/All → rewindOne. Edit diffs stored as JSON {old, new}. All writes
queue before touching disk; apply re-validates the path guard.

5 write tools: edit_file, create_file, delete_file, apply_pending, rewind.
Registered alongside 25 read-only tools from BooChat (30 total, alpha-sorted).
Write tools use a module-level inference context for sql+sessionId injection.

Inference loop via workspace dependency: apps/coder imports
createInferenceRunner, createBroker, ALL_TOOLS from @boocode/server (dist/).
apps/server gains declaration: true + exports map with typed subpath entries.
No code duplication — one inference engine shared by both apps.

API routes: POST /api/sessions/:id/messages (user msg → inference), POST stop,
GET/POST pending-changes CRUD (5 endpoints), WebSocket session streaming.

Dockerfile updated to build apps/server first (coder depends on its .d.ts).
Health endpoint reports tool count: {"ok":true,"db":true,"tools":30}.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

apps/coder/src/services/tools/index.ts

@@ -0,0 +1,26 @@
+import type { ToolDef } from './types.js';
+import { editFileTool } from './edit_file.js';
+import { createFileTool } from './create_file.js';
+import { deleteFileTool } from './delete_file.js';
+import { applyPendingTool } from './apply_pending.js';
+import { rewindTool } from './rewind.js';
+
+export type { ToolDef, ToolContext, ToolJsonSchema } from './types.js';
+
+// All BooCoder write tools. The inference loop (Phase 2B) will combine these
+// with BooChat's read-only tools to form the full tool set available to agents.
+// eslint-disable-next-line @typescript-eslint/no-explicit-any
+export const WRITE_TOOLS: readonly ToolDef<any>[] = [
+  applyPendingTool,
+  createFileTool,
+  deleteFileTool,
+  editFileTool,
+  rewindTool,
+];
+
+// eslint-disable-next-line @typescript-eslint/no-explicit-any
+export const WRITE_TOOLS_BY_NAME: ReadonlyMap<string, ToolDef<any>> = new Map(
+  WRITE_TOOLS.map((t) => [t.name, t]),
+);
+
+export { editFileTool, createFileTool, deleteFileTool, applyPendingTool, rewindTool };