Files
boocode/data/skills/superpowers/systematic-debugging/root-cause-tracing.md
indifferentketchup 0fa46cd06c v1.13.12: skills audit + token-tracking fix + codecontext + cap50 + UI cleanups
Multi-topic batch. The big-ticket item is the skills audit; the rest are
smaller patches that compounded during the audit work.

## Skills audit (rules→recipes split)

Vendored all 26 skills from /home/samkintop/opt/skills/ into data/skills/
(the boocode-repo-local skill library — see docker-compose change below).
Audited via 5 parallel Claude Code agent-teams running the
mgechev/skills-best-practices 4-step protocol (Discovery → Logic → Edge
Case → self-Architecture-Refinement) per skill, ~2 min wall-clock vs the
~3.7-hour serial estimate.

Result: 14 skills surviving (renamed to gerund form, frontmatter matched),
11 deleted (duplicates, BooCode-irrelevant patterns, Claude-already-does-
natively), 1 migrated to BOOCHAT.md/BOOCODER.md as an always-true rule
(verification-before-completion). Each surviving skill had its description
refined to fix specific trigger gaps surfaced by the protocol — 4
real-bug findings landed (dead refs, stale tags, broken sub-file
references in the original vendored content).

Audit decisions documented in openspec/changes/v1.13.12-skills-audit/
audit-notes.md. Convention codified in BOOCHAT.md/BOOCODER.md "rules vs
recipes" sections — future workflow rules go to those files (100%
present), recipes stay in data/skills/ (~6% invoke rate in multi-turn
per the Codeminer42 measurement).

## Token tracking + stale-stream banner fix (same root cause)

ws-frames.ts IsoTimestamp was z.string().min(1) but postgres returns
timestamp columns as JS Date objects. Every message_complete /
session_updated / chat_updated frame was failing the v1.13.11 Zod gate
and being silently dropped. Symptoms: token tracking blank in the UI
(no usage frames landed); the 60s no-token-activity timer tripped the
stale-stream banner because the frontend's local message state never
saw status='streaming' flip to 'complete'.

Fix: z.preprocess(v => v instanceof Date ? v.toISOString() : v,
z.string().min(1)) applied to the IsoTimestamp primitive. Centralized,
no publisher changes, works identically server + web (the parity test
still passes).

## Codecontext .codecontextignore auto-install

services/codecontext_client.ts now copies the
codecontext/.codecontextignore.template into any project's root on the
first call to that project if no .codecontextignore exists. One file
written per project, idempotent (in-memory Set guard + access-check),
silent fallback on read-only project. Stops the upstream empty-source-
file parser crash on foreign projects' node_modules — previously
required manually copying the template per project.

## Tool-call budget cap 30 → 50

services/inference/budget.ts: BUDGET_READ_ONLY and BUDGET_NO_AGENT
bumped to 50 (from 30). BUDGET_NON_READ_ONLY stays at 10 (no write
tools landed yet). Real recon sessions were hitting 30 with ~3 turns
wasted on codecontext parse failures; legitimate need was ~27, and
Architect-class system overviews want deeper recon. Headroom of 20
absorbs failure-retry turns without changing the safety floor — the
doom-loop guard (3 identical calls → abort) catches the actual
failure mode this cap was guarding against.

v1.14 (Phase C outer agent loop) will supersede this via per-agent
agent.steps. Throwaway-ish patch but unblocks deeper recon today.

## UI cleanups

- ChatPane queued-message dropdown removed. Each queued message now
  has three buttons: edit (pop back into ChatInput via sendToChat
  event), force-send (was the dropdown's only useful action), and
  cancel. Default behavior (send when streaming completes) needs no
  UI — it's the implicit do-nothing path.
- ChatThroughput removed from desktop tab strip (ChatTabBar.tsx).
  Mobile tab switcher still shows it.

## Plumbing

- .gitignore: data/* + !data/AGENTS.md + !data/skills/ negation
  patterns so the vendored skill library + agent registry become
  git-tracked while session DB state stays out.
- docker-compose.yml: removed /opt/skills:/data/skills override
  mount. Skills now live in the boocode repo at data/skills/,
  auditable per-batch. The host-level /opt/skills/ is preserved
  untouched for any other tools that read from it.
- .codecontextignore at repo root: auto-installed when codecontext
  was first called against /opt/boocode itself; matches the template.
- CLAUDE.md: updated to document the v1.13.11 publishFrame wrapper +
  message_parts table + tool_cost_stats view + DB-integration test
  pattern + host-side smoke endpoint quirk. (Pre-existing in working
  tree before this batch; shipped here for completeness.)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-22 18:58:30 +00:00

5.2 KiB

Root Cause Tracing

Overview

Bugs often manifest deep in the call stack (git init in wrong directory, file created in wrong location, database opened with wrong path). Your instinct is to fix where the error appears, but that's treating a symptom.

Core principle: Trace backward through the call chain until you find the original trigger, then fix at the source.

When to Use

digraph when_to_use {
    "Bug appears deep in stack?" [shape=diamond];
    "Can trace backwards?" [shape=diamond];
    "Fix at symptom point" [shape=box];
    "Trace to original trigger" [shape=box];
    "BETTER: Also add defense-in-depth" [shape=box];

    "Bug appears deep in stack?" -> "Can trace backwards?" [label="yes"];
    "Can trace backwards?" -> "Trace to original trigger" [label="yes"];
    "Can trace backwards?" -> "Fix at symptom point" [label="no - dead end"];
    "Trace to original trigger" -> "BETTER: Also add defense-in-depth";
}

Use when:

  • Error happens deep in execution (not at entry point)
  • Stack trace shows long call chain
  • Unclear where invalid data originated
  • Need to find which test/code triggers the problem

The Tracing Process

1. Observe the Symptom

Error: git init failed in ~/project/packages/core

2. Find Immediate Cause

What code directly causes this?

await execFileAsync('git', ['init'], { cwd: projectDir });

3. Ask: What Called This?

WorktreeManager.createSessionWorktree(projectDir, sessionId)
   called by Session.initializeWorkspace()
   called by Session.create()
   called by test at Project.create()

4. Keep Tracing Up

What value was passed?

  • projectDir = '' (empty string!)
  • Empty string as cwd resolves to process.cwd()
  • That's the source code directory!

5. Find Original Trigger

Where did empty string come from?

const context = setupCoreTest(); // Returns { tempDir: '' }
Project.create('name', context.tempDir); // Accessed before beforeEach!

Adding Stack Traces

When you can't trace manually, add instrumentation:

// Before the problematic operation
async function gitInit(directory: string) {
  const stack = new Error().stack;
  console.error('DEBUG git init:', {
    directory,
    cwd: process.cwd(),
    nodeEnv: process.env.NODE_ENV,
    stack,
  });

  await execFileAsync('git', ['init'], { cwd: directory });
}

Critical: Use console.error() in tests (not logger - may not show)

Run and capture:

npm test 2>&1 | grep 'DEBUG git init'

Analyze stack traces:

  • Look for test file names
  • Find the line number triggering the call
  • Identify the pattern (same test? same parameter?)

Finding Which Test Causes Pollution

If something appears during tests but you don't know which test:

Use the bisection script find-polluter.sh in this directory:

./find-polluter.sh '.git' 'src/**/*.test.ts'

Runs tests one-by-one, stops at first polluter. See script for usage.

Real Example: Empty projectDir

Symptom: .git created in packages/core/ (source code)

Trace chain:

  1. git init runs in process.cwd() ← empty cwd parameter
  2. WorktreeManager called with empty projectDir
  3. Session.create() passed empty string
  4. Test accessed context.tempDir before beforeEach
  5. setupCoreTest() returns { tempDir: '' } initially

Root cause: Top-level variable initialization accessing empty value

Fix: Made tempDir a getter that throws if accessed before beforeEach

Also added defense-in-depth:

  • Layer 1: Project.create() validates directory
  • Layer 2: WorkspaceManager validates not empty
  • Layer 3: NODE_ENV guard refuses git init outside tmpdir
  • Layer 4: Stack trace logging before git init

Key Principle

digraph principle {
    "Found immediate cause" [shape=ellipse];
    "Can trace one level up?" [shape=diamond];
    "Trace backwards" [shape=box];
    "Is this the source?" [shape=diamond];
    "Fix at source" [shape=box];
    "Add validation at each layer" [shape=box];
    "Bug impossible" [shape=doublecircle];
    "NEVER fix just the symptom" [shape=octagon, style=filled, fillcolor=red, fontcolor=white];

    "Found immediate cause" -> "Can trace one level up?";
    "Can trace one level up?" -> "Trace backwards" [label="yes"];
    "Can trace one level up?" -> "NEVER fix just the symptom" [label="no"];
    "Trace backwards" -> "Is this the source?";
    "Is this the source?" -> "Trace backwards" [label="no - keeps going"];
    "Is this the source?" -> "Fix at source" [label="yes"];
    "Fix at source" -> "Add validation at each layer";
    "Add validation at each layer" -> "Bug impossible";
}

NEVER fix just where the error appears. Trace back to find the original trigger.

Stack Trace Tips

In tests: Use console.error() not logger - logger may be suppressed Before operation: Log before the dangerous operation, not after it fails Include context: Directory, cwd, environment variables, timestamps Capture stack: new Error().stack shows complete call chain

Real-World Impact

From debugging session (2025-10-03):

  • Found root cause through 5-level trace
  • Fixed at source (getter validation)
  • Added 4 layers of defense
  • 1847 tests passed, zero pollution